BioTools

Find tandem repeats

Microsatellite repeats finder

Sequence:

Length of repeated sequence: Minimum:   Maximum:
Minimum number of repeats:
Minimum length of tanden repeat:
Allowed percentaje of mismatches:

Definitions
Microsatellite Repeat:
A variety of simple di- (DINUCLEOTIDE REPEATS), tri- (TRINUCLEOTIDE REPEATS), tetra-, and pentanucleotide tandem repeats (usually less than 100 bases long).

Tandem repeats:
Copies of DNA sequences which lie adjacent to each other

NOTE: for sort repeated sequences (p.e. AA or AAA), no mismatches are available.




Sequence manipulation and data Restriction digest Pcr amplification
Chaos game representation Melting temperature Protein properties
 Reduce protein alphabet Seq alignment Dna to protein Skews
Microarray analysis adaptive quantification Distance among sequences
Oligonucleotide frequency Protein to dna Random seqs
Microsatellite repeats finder Find palindromes